Hey QHS!
As long as you are on the new QBO integration, the payment should sync over with the full amount, roughly 2 business days later, the "payout" will sync, this will be the deposit amount after the fees are removed, as long as you have this set up to match your checking account used for Jobber payments, no reconciliation is needed.
Quickbooks should then match the deposit to the payment and the fee to a separate expense account. It is important that you do not try to match the deposit manually, as it will not reconcile.
Here is a Help Center Article that explains how this works.